CH ELM Expecting Organism Specification - TTL Representation

This page is part of the Observations of notifiable communicable infectious diseases (v1.9.1: Release) based on FHIR (HL7® FHIR® Standard) R4. This is the current published version. For a full list of available versions, see the Directory of published versions
: CH ELM Expecting Organism Specification - TTL Representation

Active as of 2025-03-26
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@prefix fhir: <http://hl7.org/fhir/> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

# - resource -------------------------------------------------------------------

 a fhir:ValueSet ;
  fhir:nodeRole fhir:treeRoot ;
  fhir:id [ fhir:v "ch-elm-expecting-organism-specification"] ; # 
  fhir:text [
fhir:status [ fhir:v "generated" ] ;
fhir:div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: ValueSet ch-elm-expecting-organism-specification</b></p><a name=\"ch-elm-expecting-organism-specification\"> </a><a name=\"hcch-elm-expecting-organism-specification\"> </a><a name=\"ch-elm-expecting-organism-specification-en-US\"> </a><ul><li>Include these codes as defined in <a href=\"http://loinc.org\"><code>http://loinc.org</code></a><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td><td><b><a href=\"ValueSet-ch-elm-results-completion-vs.html\">CH ELM Expecting Organism Specification To Results Completion Vs</a></b></td></tr><tr><td><a href=\"https://loinc.org/100911-7/\">100911-7</a></td><td>Campylobacter sp [Presence] in Stool by Organism specific culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-camp-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-camp-org</a></td></tr><tr><td><a href=\"https://loinc.org/101003-2/\">101003-2</a></td><td>Monkeypox virus clade [Type] in Specimen by Sequencing</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-mpox-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-mpox-org</a></td></tr><tr><td><a href=\"https://loinc.org/101219-4/\">101219-4</a></td><td>Legionella sp DNA [Presence] in Specimen by NAA with probe detection</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-leg-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-leg-org</a></td></tr><tr><td><a href=\"https://loinc.org/104376-9/\">104376-9</a></td><td>Diphtheria toxin DNA [Presence] in Specimen by NAA with probe detection</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-diph-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-diph-org</a></td></tr><tr><td><a href=\"https://loinc.org/14357-8/\">14357-8</a></td><td>Microscopic observation [Identifier] in Cerebral spinal fluid by Gram stain</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-men-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-men-org</a></td></tr><tr><td><a href=\"https://loinc.org/17563-8/\">17563-8</a></td><td>Salmonella sp identified in Specimen by Organism specific culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-sal-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-sal-org</a></td></tr><tr><td><a href=\"https://loinc.org/22826-2/\">22826-2</a></td><td>Influenza virus A identified in Specimen by Bioassay</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-influenza-hxny-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-influenza-hxny-org</a></td></tr><tr><td><a href=\"https://loinc.org/24102-6/\">24102-6</a></td><td>Corynebacterium toxin [Presence] in Specimen by Immune diffusion (ID)</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-diph-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-diph-org</a></td></tr><tr><td><a href=\"https://loinc.org/32781-7/\">32781-7</a></td><td>Legionella sp Ag [Presence] in Urine</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-leg-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-leg-org</a></td></tr><tr><td><a href=\"https://loinc.org/38353-9/\">38353-9</a></td><td>Streptococcus sp identified in Specimen by Organism specific culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-pneu-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-pneu-org</a></td></tr><tr><td><a href=\"https://loinc.org/39025-2/\">39025-2</a></td><td>Influenza virus A hemagglutinin cDNA [Identifier] in Specimen by Sequencing</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-influenza-hxny-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-influenza-hxny-org</a></td></tr><tr><td><a href=\"https://loinc.org/41625-5/\">41625-5</a></td><td>Brucella sp DNA [Identifier] in Specimen by NAA with probe detection</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-bru-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-bru-org</a></td></tr><tr><td><a href=\"https://loinc.org/43389-6/\">43389-6</a></td><td>Streptococcus sp identified in Isolate by Organism specific culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-pneu-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-pneu-org</a></td></tr><tr><td><a href=\"https://loinc.org/46454-5/\">46454-5</a></td><td>Shigella sp [Presence] in Specimen by Organism specific culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-shi-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-shi-org</a></td></tr><tr><td><a href=\"https://loinc.org/46732-4/\">46732-4</a></td><td>Francisella tularensis subtype [Identifier] in Specimen by NAA with probe detection</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-tul-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-tul-org</a></td></tr><tr><td><a href=\"https://loinc.org/47085-6/\">47085-6</a></td><td>Plasmodium sp DNA [Presence] in Blood by NAA with probe detection</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-mal-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-mal-org</a></td></tr><tr><td><a href=\"https://loinc.org/49612-5/\">49612-5</a></td><td>Salmonella sp DNA [Presence] in Specimen by NAA with probe detection</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-sal-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-sal-org</a></td></tr><tr><td><a href=\"https://loinc.org/50687-3/\">50687-3</a></td><td>Plasmodium sp Ag [Presence] in Blood</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-mal-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-mal-org</a></td></tr><tr><td><a href=\"https://loinc.org/50697-2/\">50697-2</a></td><td>Influenza virus A Ag [Identifier] in Isolate</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-influenza-hxny-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-influenza-hxny-org</a></td></tr><tr><td><a href=\"https://loinc.org/51587-4/\">51587-4</a></td><td>Plasmodium sp [Presence] in Blood by Light microscopy</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-mal-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-mal-org</a></td></tr><tr><td><a href=\"https://loinc.org/534-8/\">534-8</a></td><td>Mycobacterium sp identified in Cerebral spinal fluid by Organism specific culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-tub-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-tub-org</a></td></tr><tr><td><a href=\"https://loinc.org/539-7/\">539-7</a></td><td>Mycobacterium sp identified in Sputum by Organism specific culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-tub-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-tub-org</a></td></tr><tr><td><a href=\"https://loinc.org/540-5/\">540-5</a></td><td>Mycobacterium sp identified in Tissue by Organism specific culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-tub-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-tub-org</a></td></tr><tr><td><a href=\"https://loinc.org/541-3/\">541-3</a></td><td>Mycobacterium sp identified in Urine by Organism specific culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-tub-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-tub-org</a></td></tr><tr><td><a href=\"https://loinc.org/543-9/\">543-9</a></td><td>Mycobacterium sp identified in Specimen by Organism specific culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-tub-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-tub-org</a></td></tr><tr><td><a href=\"https://loinc.org/552-0/\">552-0</a></td><td>Brucella sp identified in Specimen by Organism specific culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-bru-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-bru-org</a></td></tr><tr><td><a href=\"https://loinc.org/58473-0/\">58473-0</a></td><td>Haemophilus influenzae serotype DNA [Identifier] in Specimen by NAA with probe detection</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-haem-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-haem-org</a></td></tr><tr><td><a href=\"https://loinc.org/589-2/\">589-2</a></td><td>Legionella sp identified in Bronchial specimen by Organism specific culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-leg-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-leg-org</a></td></tr><tr><td><a href=\"https://loinc.org/590-0/\">590-0</a></td><td>Legionella sp identified in Sputum by Organism specific culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-leg-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-leg-org</a></td></tr><tr><td><a href=\"https://loinc.org/593-4/\">593-4</a></td><td>Legionella sp identified in Specimen by Organism specific culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-leg-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-leg-org</a></td></tr><tr><td><a href=\"https://loinc.org/59423-4/\">59423-4</a></td><td>Influenza virus A hemagglutinin type RNA [Identifier] in Specimen by NAA with probe detection</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-influenza-hxny-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-influenza-hxny-org</a></td></tr><tr><td><a href=\"https://loinc.org/60422-3/\">60422-3</a></td><td>Measles virus genotype [Identifier] in Specimen by NAA with probe detection</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-mea-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-mea-org</a></td></tr><tr><td><a href=\"https://loinc.org/65756-9/\">65756-9</a></td><td>Salmonella sp serovar [Type] in Isolate</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-sal-org-complete\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-sal-org-complete</a></td></tr><tr><td><a href=\"https://loinc.org/6578-9/\">6578-9</a></td><td>Vibrio sp identified in Blood by Organism specific culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-chol-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-chol-org</a></td></tr><tr><td><a href=\"https://loinc.org/6579-7/\">6579-7</a></td><td>Vibrio sp identified in Stool by Organism specific culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-chol-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-chol-org</a></td></tr><tr><td><a href=\"https://loinc.org/6581-3/\">6581-3</a></td><td>Vibrio sp identified in Specimen by Organism specific culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-chol-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-chol-org</a></td></tr><tr><td><a href=\"https://loinc.org/6584-7/\">6584-7</a></td><td>Virus identified in Specimen by Culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-virus-cult-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-virus-cult-org</a></td></tr><tr><td><a href=\"https://loinc.org/6600-1/\">6600-1</a></td><td>Haemophilus sp identified in Specimen by Organism specific culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-haem-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-haem-org</a></td></tr><tr><td><a href=\"https://loinc.org/6604-3/\">6604-3</a></td><td>Influenza virus identified in Specimen by Organism specific culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-influenza-hxny-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-influenza-hxny-org</a></td></tr><tr><td><a href=\"https://loinc.org/6609-2/\">6609-2</a></td><td>Listeria sp identified in Specimen by Organism specific culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-lis-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-lis-org</a></td></tr><tr><td><a href=\"https://loinc.org/70569-9/\">70569-9</a></td><td>Plasmodium sp Ag [Identifier] in Blood by Rapid immunoassay</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-mal-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-mal-org</a></td></tr><tr><td><a href=\"https://loinc.org/74037-3/\">74037-3</a></td><td>Transmissible spongiform encephalopathy [Identifier] in Brain by Light microscopy</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-cjd-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-cjd-org</a></td></tr><tr><td><a href=\"https://loinc.org/75756-7/\">75756-7</a></td><td>Bacteria identified in Isolate by MS.MALDI-TOF</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-maldi-tof-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-maldi-tof-org</a></td></tr><tr><td><a href=\"https://loinc.org/7899-8/\">7899-8</a></td><td>Hantavirus RNA [Presence] in Serum by NAA with probe detection</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-hanta-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-hanta-org</a></td></tr><tr><td><a href=\"https://loinc.org/82300-5/\">82300-5</a></td><td>Shigella sp [Presence] in Stool by Culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-shi-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-shi-org</a></td></tr><tr><td><a href=\"https://loinc.org/82301-3/\">82301-3</a></td><td>Salmonella sp [Presence] in Stool by Culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-sal-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-sal-org</a></td></tr><tr><td><a href=\"https://loinc.org/86520-4/\">86520-4</a></td><td>Hantavirus RNA [Presence] in Blood by NAA with probe detection</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-hanta-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-hanta-org</a></td></tr><tr><td><a href=\"https://loinc.org/88585-5/\">88585-5</a></td><td>Legionella sp identified in Lower respiratory specimen by Organism specific culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-leg-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-leg-org</a></td></tr><tr><td><a href=\"https://loinc.org/88588-9/\">88588-9</a></td><td>Legionella sp DNA [Identifier] in Lower respiratory specimen by NAA with probe detection</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-leg-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-leg-org</a></td></tr><tr><td><a href=\"https://loinc.org/90066-2/\">90066-2</a></td><td>Corynebacterium sp identified in Isolate by Organism specific culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-diph-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-diph-org</a></td></tr><tr><td><a href=\"https://loinc.org/92786-3/\">92786-3</a></td><td>Corynebacterium sp DNA [Presence] by NAA with probe detection in Positive blood culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-diph-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-diph-org</a></td></tr><tr><td><a href=\"https://loinc.org/93385-3/\">93385-3</a></td><td>Salmonella sp DNA [Presence] by NAA with probe detection in Positive blood culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-sal-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-sal-org</a></td></tr><tr><td><a href=\"https://loinc.org/97313-1/\">97313-1</a></td><td>Salmonella sp DNA [Presence] in Stool by NAA with probe detection</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-sal-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-sal-org</a></td></tr><tr><td><a href=\"https://loinc.org/97513-6/\">97513-6</a></td><td>Campylobacter sp [Presence] in Specimen by Organism specific culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-camp-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-camp-org</a></td></tr><tr><td><a href=\"https://loinc.org/9823-6/\">9823-6</a></td><td>Mycobacterium sp identified in Bronchial specimen by Organism specific culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-tub-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-tub-org</a></td></tr></table></li></ul></div>"^^rdf:XMLLiteral
  ] ; # 
  fhir:url [ fhir:v "http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-expecting-organism-specification"^^xsd:anyURI] ; # 
  fhir:version [ fhir:v "1.9.1"] ; # 
  fhir:name [ fhir:v "ChElmExpectingOrganismSpecification"] ; # 
  fhir:title [ fhir:v "CH ELM Expecting Organism Specification"] ; # 
  fhir:status [ fhir:v "active"] ; # 
  fhir:experimental [ fhir:v false] ; # 
  fhir:date [ fhir:v "2025-03-26T08:01:17+00:00"^^xsd:dateTime] ; # 
  fhir:publisher [ fhir:v "Federal Office of Public Health FOPH"] ; # 
  fhir:contact ( [
fhir:name [ fhir:v "Federal Office of Public Health FOPH" ] ;
    ( fhir:telecom [
fhir:system [ fhir:v "url" ] ;
fhir:value [ fhir:v "https://www.bag.admin.ch/bag/en/home/das-bag/kontakt-standort.html" ]     ] )
  ] ) ; # 
  fhir:description [ fhir:v "This CH ELM value set includes the leading codes for the laboratory test results, which have to be completed by another code for the expecting organism."] ; # 
  fhir:jurisdiction ( [
    ( fhir:coding [
fhir:system [ fhir:v "urn:iso:std:iso:3166"^^xsd:anyURI ] ;
fhir:code [ fhir:v "CH" ]     ] )
  ] ) ; # 
  fhir:copyright [ fhir:v "CC0-1.0"] ; # 
  fhir:compose [
    ( fhir:include [
fhir:system [ fhir:v "http://loinc.org"^^xsd:anyURI ] ;
      ( fhir:concept [
fhir:code [ fhir:v "100911-7" ] ;
fhir:display [ fhir:v "Campylobacter sp [Presence] in Stool by Organism specific culture" ]       ] [
fhir:code [ fhir:v "101003-2" ] ;
fhir:display [ fhir:v "Monkeypox virus clade [Type] in Specimen by Sequencing" ]       ] [
fhir:code [ fhir:v "101219-4" ] ;
fhir:display [ fhir:v "Legionella sp DNA [Presence] in Specimen by NAA with probe detection" ]       ] [
fhir:code [ fhir:v "104376-9" ] ;
fhir:display [ fhir:v "Diphtheria toxin DNA [Presence] in Specimen by NAA with probe detection" ]       ] [
fhir:code [ fhir:v "14357-8" ] ;
fhir:display [ fhir:v "Microscopic observation [Identifier] in Cerebral spinal fluid by Gram stain" ]       ] [
fhir:code [ fhir:v "17563-8" ] ;
fhir:display [ fhir:v "Salmonella sp identified in Specimen by Organism specific culture" ]       ] [
fhir:code [ fhir:v "22826-2" ] ;
fhir:display [ fhir:v "Influenza virus A identified in Specimen by Bioassay" ]       ] [
fhir:code [ fhir:v "24102-6" ] ;
fhir:display [ fhir:v "Corynebacterium toxin [Presence] in Specimen by Immune diffusion (ID)" ]       ] [
fhir:code [ fhir:v "32781-7" ] ;
fhir:display [ fhir:v "Legionella sp Ag [Presence] in Urine" ]       ] [
fhir:code [ fhir:v "38353-9" ] ;
fhir:display [ fhir:v "Streptococcus sp identified in Specimen by Organism specific culture" ]       ] [
fhir:code [ fhir:v "39025-2" ] ;
fhir:display [ fhir:v "Influenza virus A hemagglutinin cDNA [Identifier] in Specimen by Sequencing" ]       ] [
fhir:code [ fhir:v "41625-5" ] ;
fhir:display [ fhir:v "Brucella sp DNA [Identifier] in Specimen by NAA with probe detection" ]       ] [
fhir:code [ fhir:v "43389-6" ] ;
fhir:display [ fhir:v "Streptococcus sp identified in Isolate by Organism specific culture" ]       ] [
fhir:code [ fhir:v "46454-5" ] ;
fhir:display [ fhir:v "Shigella sp [Presence] in Specimen by Organism specific culture" ]       ] [
fhir:code [ fhir:v "46732-4" ] ;
fhir:display [ fhir:v "Francisella tularensis subtype [Identifier] in Specimen by NAA with probe detection" ]       ] [
fhir:code [ fhir:v "47085-6" ] ;
fhir:display [ fhir:v "Plasmodium sp DNA [Presence] in Blood by NAA with probe detection" ]       ] [
fhir:code [ fhir:v "49612-5" ] ;
fhir:display [ fhir:v "Salmonella sp DNA [Presence] in Specimen by NAA with probe detection" ]       ] [
fhir:code [ fhir:v "50687-3" ] ;
fhir:display [ fhir:v "Plasmodium sp Ag [Presence] in Blood" ]       ] [
fhir:code [ fhir:v "50697-2" ] ;
fhir:display [ fhir:v "Influenza virus A Ag [Identifier] in Isolate" ]       ] [
fhir:code [ fhir:v "51587-4" ] ;
fhir:display [ fhir:v "Plasmodium sp [Presence] in Blood by Light microscopy" ]       ] [
fhir:code [ fhir:v "534-8" ] ;
fhir:display [ fhir:v "Mycobacterium sp identified in Cerebral spinal fluid by Organism specific culture" ]       ] [
fhir:code [ fhir:v "539-7" ] ;
fhir:display [ fhir:v "Mycobacterium sp identified in Sputum by Organism specific culture" ]       ] [
fhir:code [ fhir:v "540-5" ] ;
fhir:display [ fhir:v "Mycobacterium sp identified in Tissue by Organism specific culture" ]       ] [
fhir:code [ fhir:v "541-3" ] ;
fhir:display [ fhir:v "Mycobacterium sp identified in Urine by Organism specific culture" ]       ] [
fhir:code [ fhir:v "543-9" ] ;
fhir:display [ fhir:v "Mycobacterium sp identified in Specimen by Organism specific culture" ]       ] [
fhir:code [ fhir:v "552-0" ] ;
fhir:display [ fhir:v "Brucella sp identified in Specimen by Organism specific culture" ]       ] [
fhir:code [ fhir:v "58473-0" ] ;
fhir:display [ fhir:v "Haemophilus influenzae serotype DNA [Identifier] in Specimen by NAA with probe detection" ]       ] [
fhir:code [ fhir:v "589-2" ] ;
fhir:display [ fhir:v "Legionella sp identified in Bronchial specimen by Organism specific culture" ]       ] [
fhir:code [ fhir:v "590-0" ] ;
fhir:display [ fhir:v "Legionella sp identified in Sputum by Organism specific culture" ]       ] [
fhir:code [ fhir:v "593-4" ] ;
fhir:display [ fhir:v "Legionella sp identified in Specimen by Organism specific culture" ]       ] [
fhir:code [ fhir:v "59423-4" ] ;
fhir:display [ fhir:v "Influenza virus A hemagglutinin type RNA [Identifier] in Specimen by NAA with probe detection" ]       ] [
fhir:code [ fhir:v "60422-3" ] ;
fhir:display [ fhir:v "Measles virus genotype [Identifier] in Specimen by NAA with probe detection" ]       ] [
fhir:code [ fhir:v "65756-9" ] ;
fhir:display [ fhir:v "Salmonella sp serovar [Type] in Isolate" ]       ] [
fhir:code [ fhir:v "6578-9" ] ;
fhir:display [ fhir:v "Vibrio sp identified in Blood by Organism specific culture" ]       ] [
fhir:code [ fhir:v "6579-7" ] ;
fhir:display [ fhir:v "Vibrio sp identified in Stool by Organism specific culture" ]       ] [
fhir:code [ fhir:v "6581-3" ] ;
fhir:display [ fhir:v "Vibrio sp identified in Specimen by Organism specific culture" ]       ] [
fhir:code [ fhir:v "6584-7" ] ;
fhir:display [ fhir:v "Virus identified in Specimen by Culture" ]       ] [
fhir:code [ fhir:v "6600-1" ] ;
fhir:display [ fhir:v "Haemophilus sp identified in Specimen by Organism specific culture" ]       ] [
fhir:code [ fhir:v "6604-3" ] ;
fhir:display [ fhir:v "Influenza virus identified in Specimen by Organism specific culture" ]       ] [
fhir:code [ fhir:v "6609-2" ] ;
fhir:display [ fhir:v "Listeria sp identified in Specimen by Organism specific culture" ]       ] [
fhir:code [ fhir:v "70569-9" ] ;
fhir:display [ fhir:v "Plasmodium sp Ag [Identifier] in Blood by Rapid immunoassay" ]       ] [
fhir:code [ fhir:v "74037-3" ] ;
fhir:display [ fhir:v "Transmissible spongiform encephalopathy [Identifier] in Brain by Light microscopy" ]       ] [
fhir:code [ fhir:v "75756-7" ] ;
fhir:display [ fhir:v "Bacteria identified in Isolate by MS.MALDI-TOF" ]       ] [
fhir:code [ fhir:v "7899-8" ] ;
fhir:display [ fhir:v "Hantavirus RNA [Presence] in Serum by NAA with probe detection" ]       ] [
fhir:code [ fhir:v "82300-5" ] ;
fhir:display [ fhir:v "Shigella sp [Presence] in Stool by Culture" ]       ] [
fhir:code [ fhir:v "82301-3" ] ;
fhir:display [ fhir:v "Salmonella sp [Presence] in Stool by Culture" ]       ] [
fhir:code [ fhir:v "86520-4" ] ;
fhir:display [ fhir:v "Hantavirus RNA [Presence] in Blood by NAA with probe detection" ]       ] [
fhir:code [ fhir:v "88585-5" ] ;
fhir:display [ fhir:v "Legionella sp identified in Lower respiratory specimen by Organism specific culture" ]       ] [
fhir:code [ fhir:v "88588-9" ] ;
fhir:display [ fhir:v "Legionella sp DNA [Identifier] in Lower respiratory specimen by NAA with probe detection" ]       ] [
fhir:code [ fhir:v "90066-2" ] ;
fhir:display [ fhir:v "Corynebacterium sp identified in Isolate by Organism specific culture" ]       ] [
fhir:code [ fhir:v "92786-3" ] ;
fhir:display [ fhir:v "Corynebacterium sp DNA [Presence] by NAA with probe detection in Positive blood culture" ]       ] [
fhir:code [ fhir:v "93385-3" ] ;
fhir:display [ fhir:v "Salmonella sp DNA [Presence] by NAA with probe detection in Positive blood culture" ]       ] [
fhir:code [ fhir:v "97313-1" ] ;
fhir:display [ fhir:v "Salmonella sp DNA [Presence] in Stool by NAA with probe detection" ]       ] [
fhir:code [ fhir:v "97513-6" ] ;
fhir:display [ fhir:v "Campylobacter sp [Presence] in Specimen by Organism specific culture" ]       ] [
fhir:code [ fhir:v "9823-6" ] ;
fhir:display [ fhir:v "Mycobacterium sp identified in Bronchial specimen by Organism specific culture" ]       ] )     ] )
  ] . #