Swissnoso Implementation Guide (R4)
1.0.0 - STU 1
This page is part of the Swissnoso Implementation Guide (R4) (v1.0.0: STU 1) based on FHIR R4. This is the current published version. For a full list of available versions, see the Directory of published versions
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<id value="Germ1-20210706-181521210706"/>
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<profile
value="http://fhir.ch/ig/swissnoso/StructureDefinition/swissnoso-observation-germ"/>
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<status value="generated"/>
<div xmlns="http://www.w3.org/1999/xhtml"><p><b>Generated Narrative</b></p><div style="display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%"><p style="margin-bottom: 0px">Resource "Germ1-20210706-181521210706" </p><p style="margin-bottom: 0px">Profile: <a href="StructureDefinition-swissnoso-observation-germ.html">Swissnoso Observation Germ</a></p></div><p><b>partOf</b>: <a href="Procedure-Microbiology-20210706-181521210706.html">Procedure/Microbiology-20210706-181521210706</a></p><p><b>status</b>: final</p><p><b>code</b>: Bacteria [Presence] in Urine <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="https://loinc.org/">LOINC</a>#87829-8)</span></p><p><b>subject</b>: <a href="Patient-FridolinMueller.html">Patient/FridolinMueller</a></p><p><b>encounter</b>: <a href="Encounter-Encounter-181521210706.html">Encounter/Encounter-181521210706</a></p><p><b>effective</b>: 2021-07-06</p><blockquote><p><b>component</b></p><p><b>code</b>: Bacteria identified in Urine by Culture <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="https://loinc.org/">LOINC</a>#630-4)</span></p><p><b>value</b>: Escherichia coli (organism) <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="https://browser.ihtsdotools.org/">SNOMED CT</a>#112283007)</span></p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Bacteria [#/volume] in Urine by Automated count <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="https://loinc.org/">LOINC</a>#51480-2)</span></p><p><b>value</b>: >=10E5 CFU/ml <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="CodeSystem-swissnoso-bacterial-count-in-urine.html">Swissnoso Bacterial Count in Urine</a>#2)</span></p></blockquote></div>
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<reference value="Procedure/Microbiology-20210706-181521210706"/>
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<status value="final"/>
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<system value="http://loinc.org"/>
<code value="87829-8"/>
<display value="Bacteria [Presence] in Urine"/>
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<subject>
<reference value="Patient/FridolinMueller"/>
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<encounter>
<reference value="Encounter/Encounter-181521210706"/>
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<effectiveDateTime value="2021-07-06"/>
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<code>
<coding>
<system value="http://loinc.org"/>
<code value="630-4"/>
<display value="Bacteria identified in Urine by Culture"/>
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<valueCodeableConcept>
<coding>
<system value="http://snomed.info/sct"/>
<code value="112283007"/>
<display value="Escherichia coli (organism)"/>
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<component>
<code>
<coding>
<system value="http://loinc.org"/>
<code value="51480-2"/>
<display value="Bacteria [#/volume] in Urine by Automated count"/>
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<valueCodeableConcept>
<coding>
<system
value="http://fhir.ch/ig/swissnoso/CodeSystem/swissnoso-bacterial-count-in-urine"/>
<code value="2"/>
<display value=">=10E5 CFU/ml"/>
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