This page is part of the Swissnoso Implementation Guide (R4) (v1.0.0: STU 1) based on FHIR R4. This is the current published version. For a full list of available versions, see the Directory of published versions

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: Germ 1 (06.07.2021) - JSON Representation

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{
  "resourceType" : "Observation",
  "id" : "Germ1-20210706-181521210706",
  "meta" : {
    "profile" : [
      "http://fhir.ch/ig/swissnoso/StructureDefinition/swissnoso-observation-germ"
    ]
  },
  "text" : {
    "status" : "generated",
    "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative</b></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource \"Germ1-20210706-181521210706\" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-swissnoso-observation-germ.html\">Swissnoso Observation Germ</a></p></div><p><b>partOf</b>: <a href=\"Procedure-Microbiology-20210706-181521210706.html\">Procedure/Microbiology-20210706-181521210706</a></p><p><b>status</b>: final</p><p><b>code</b>: Bacteria [Presence] in Urine <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#87829-8)</span></p><p><b>subject</b>: <a href=\"Patient-FridolinMueller.html\">Patient/FridolinMueller</a></p><p><b>encounter</b>: <a href=\"Encounter-Encounter-181521210706.html\">Encounter/Encounter-181521210706</a></p><p><b>effective</b>: 2021-07-06</p><blockquote><p><b>component</b></p><p><b>code</b>: Bacteria identified in Urine by Culture <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#630-4)</span></p><p><b>value</b>: Escherichia coli (organism) <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://browser.ihtsdotools.org/\">SNOMED CT</a>#112283007)</span></p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: Bacteria [#/volume] in Urine by Automated count <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#51480-2)</span></p><p><b>value</b>: &gt;=10E5 CFU/ml <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-swissnoso-bacterial-count-in-urine.html\">Swissnoso Bacterial Count in Urine</a>#2)</span></p></blockquote></div>"
  },
  "partOf" : [
    {
      "reference" : "Procedure/Microbiology-20210706-181521210706"
    }
  ],
  "status" : "final",
  "code" : {
    "coding" : [
      {
        "system" : "http://loinc.org",
        "code" : "87829-8",
        "display" : "Bacteria [Presence] in Urine"
      }
    ]
  },
  "subject" : {
    "reference" : "Patient/FridolinMueller"
  },
  "encounter" : {
    "reference" : "Encounter/Encounter-181521210706"
  },
  "effectiveDateTime" : "2021-07-06",
  "component" : [
    {
      "code" : {
        "coding" : [
          {
            "system" : "http://loinc.org",
            "code" : "630-4",
            "display" : "Bacteria identified in Urine by Culture"
          }
        ]
      },
      "valueCodeableConcept" : {
        "coding" : [
          {
            "system" : "http://snomed.info/sct",
            "code" : "112283007",
            "display" : "Escherichia coli (organism)"
          }
        ]
      }
    },
    {
      "code" : {
        "coding" : [
          {
            "system" : "http://loinc.org",
            "code" : "51480-2",
            "display" : "Bacteria [#/volume] in Urine by Automated count"
          }
        ]
      },
      "valueCodeableConcept" : {
        "coding" : [
          {
            "system" : "http://fhir.ch/ig/swissnoso/CodeSystem/swissnoso-bacterial-count-in-urine",
            "code" : "2",
            "display" : ">=10E5 CFU/ml"
          }
        ]
      }
    }
  ]
}