CH ELM (R4)
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: CH ELM Expecting Organism Specification - JSON Representation

Active as of 2024-06-17

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{
  "resourceType" : "ValueSet",
  "id" : "ch-elm-expecting-organism-specification",
  "text" : {
    "status" : "generated",
    "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><ul><li>Include these codes as defined in <a href=\"http://loinc.org\"><code>http://loinc.org</code></a><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td><td><b><a href=\"ValueSet-ch-elm-results-completion-vs.html\">CH ELM Expecting Organism Specification To Results Completion Vs</a></b></td></tr><tr><td><a href=\"https://loinc.org/100911-7/\">100911-7</a></td><td>Campylobacter sp [Presence] in Stool by Organism specific culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-camp-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-camp-org</a></td></tr><tr><td><a href=\"https://loinc.org/101219-4/\">101219-4</a></td><td>Legionella sp DNA [Presence] in Specimen by NAA with probe detection</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-leg-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-leg-org</a></td></tr><tr><td><a href=\"https://loinc.org/101427-3/\">101427-3</a></td><td>Shigella sp DNA [Presence] in Stool by NAA with probe detection</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-shi-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-shi-org</a></td></tr><tr><td><a href=\"https://loinc.org/26621-3/\">26621-3</a></td><td>Legionella sp Ag [Presence] in Specimen</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-leg-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-leg-org</a></td></tr><tr><td><a href=\"https://loinc.org/32781-7/\">32781-7</a></td><td>Legionella sp Ag [Presence] in Urine</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-leg-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-leg-org</a></td></tr><tr><td><a href=\"https://loinc.org/38394-3/\">38394-3</a></td><td>Legionella sp identified in Urine by Organism specific culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-leg-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-leg-org</a></td></tr><tr><td><a href=\"https://loinc.org/46454-5/\">46454-5</a></td><td>Shigella sp [Presence] in Specimen by Organism specific culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-shi-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-shi-org</a></td></tr><tr><td><a href=\"https://loinc.org/46455-2/\">46455-2</a></td><td>Shigella sp DNA [Presence] in Specimen by NAA with probe detection</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-shi-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-shi-org</a></td></tr><tr><td><a href=\"https://loinc.org/47085-6/\">47085-6</a></td><td>Plasmodium sp DNA [Presence] in Blood by NAA with probe detection</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-mal-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-mal-org</a></td></tr><tr><td><a href=\"https://loinc.org/49614-1/\">49614-1</a></td><td>Campylobacter sp DNA [Identifier] in Specimen by NAA with probe detection</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-camp-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-camp-org</a></td></tr><tr><td><a href=\"https://loinc.org/4992-4/\">4992-4</a></td><td>Campylobacter sp rRNA [Presence] in Specimen by Probe</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-camp-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-camp-org</a></td></tr><tr><td><a href=\"https://loinc.org/50687-3/\">50687-3</a></td><td>Plasmodium sp Ag [Presence] in Blood</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-mal-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-mal-org</a></td></tr><tr><td><a href=\"https://loinc.org/51587-4/\">51587-4</a></td><td>Plasmodium sp [Presence] in Blood by Light microscopy</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-mal-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-mal-org</a></td></tr><tr><td><a href=\"https://loinc.org/589-2/\">589-2</a></td><td>Legionella sp identified in Bronchial specimen by Organism specific culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-leg-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-leg-org</a></td></tr><tr><td><a href=\"https://loinc.org/590-0/\">590-0</a></td><td>Legionella sp identified in Sputum by Organism specific culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-leg-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-leg-org</a></td></tr><tr><td><a href=\"https://loinc.org/593-4/\">593-4</a></td><td>Legionella sp identified in Specimen by Organism specific culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-leg-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-leg-org</a></td></tr><tr><td><a href=\"https://loinc.org/70569-9/\">70569-9</a></td><td>Plasmodium sp Ag [Identifier] in Blood by Rapid immunoassay</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-mal-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-mal-org</a></td></tr><tr><td><a href=\"https://loinc.org/71429-5/\">71429-5</a></td><td>Campylobacter sp DNA.diarrheagenic [Presence] in Stool by NAA with probe detection</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-camp-diar-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-camp-diar-org</a></td></tr><tr><td><a href=\"https://loinc.org/82300-5/\">82300-5</a></td><td>Shigella sp [Presence] in Stool by Culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-shi-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-shi-org</a></td></tr><tr><td><a href=\"https://loinc.org/85827-4/\">85827-4</a></td><td>Carbapenem resistance bla OXA-48-like gene [Presence] by Molecular method</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-cpe-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-cpe-org</a></td></tr><tr><td><a href=\"https://loinc.org/97513-6/\">97513-6</a></td><td>Campylobacter sp [Presence] in Specimen by Organism specific culture</td><td><span title=\"RELATEDTO\">?</span><a href=\"CodeSystem-ch-elm-results-completion-vs.html#ch-elm-results-completion-vs-http.58.47.47fhir.46ch.47ig.47ch-elm.47ValueSet.47ch-elm-results-camp-org\">http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-camp-org</a></td></tr></table></li></ul></div>"
  },
  "url" : "http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-expecting-organism-specification",
  "version" : "1.3.1",
  "name" : "ChElmExpectingOrganismSpecification",
  "title" : "CH ELM Expecting Organism Specification",
  "status" : "active",
  "experimental" : false,
  "date" : "2024-06-17T08:47:24+00:00",
  "publisher" : "Federal Office of Public Health FOPH",
  "contact" : [
    {
      "name" : "Federal Office of Public Health FOPH",
      "telecom" : [
        {
          "system" : "url",
          "value" : "https://www.bag.admin.ch/bag/en/home/das-bag/kontakt-standort.html"
        }
      ]
    }
  ],
  "description" : "This CH ELM value set includes the leading codes for the laboratory test results, which have to be completed by another code for the expecting organism.",
  "jurisdiction" : [
    {
      "coding" : [
        {
          "system" : "urn:iso:std:iso:3166",
          "code" : "CHE"
        }
      ]
    }
  ],
  "copyright" : "CC0-1.0",
  "compose" : {
    "include" : [
      {
        "system" : "http://loinc.org",
        "concept" : [
          {
            "code" : "100911-7",
            "display" : "Campylobacter sp [Presence] in Stool by Organism specific culture"
          },
          {
            "code" : "101219-4",
            "display" : "Legionella sp DNA [Presence] in Specimen by NAA with probe detection"
          },
          {
            "code" : "101427-3",
            "display" : "Shigella sp DNA [Presence] in Stool by NAA with probe detection"
          },
          {
            "code" : "26621-3",
            "display" : "Legionella sp Ag [Presence] in Specimen"
          },
          {
            "code" : "32781-7",
            "display" : "Legionella sp Ag [Presence] in Urine"
          },
          {
            "code" : "38394-3",
            "display" : "Legionella sp identified in Urine by Organism specific culture"
          },
          {
            "code" : "46454-5",
            "display" : "Shigella sp [Presence] in Specimen by Organism specific culture"
          },
          {
            "code" : "46455-2",
            "display" : "Shigella sp DNA [Presence] in Specimen by NAA with probe detection"
          },
          {
            "code" : "47085-6",
            "display" : "Plasmodium sp DNA [Presence] in Blood by NAA with probe detection"
          },
          {
            "code" : "49614-1",
            "display" : "Campylobacter sp DNA [Identifier] in Specimen by NAA with probe detection"
          },
          {
            "code" : "4992-4",
            "display" : "Campylobacter sp rRNA [Presence] in Specimen by Probe"
          },
          {
            "code" : "50687-3",
            "display" : "Plasmodium sp Ag [Presence] in Blood"
          },
          {
            "code" : "51587-4",
            "display" : "Plasmodium sp [Presence] in Blood by Light microscopy"
          },
          {
            "code" : "589-2",
            "display" : "Legionella sp identified in Bronchial specimen by Organism specific culture"
          },
          {
            "code" : "590-0",
            "display" : "Legionella sp identified in Sputum by Organism specific culture"
          },
          {
            "code" : "593-4",
            "display" : "Legionella sp identified in Specimen by Organism specific culture"
          },
          {
            "code" : "70569-9",
            "display" : "Plasmodium sp Ag [Identifier] in Blood by Rapid immunoassay"
          },
          {
            "code" : "71429-5",
            "display" : "Campylobacter sp DNA.diarrheagenic [Presence] in Stool by NAA with probe detection"
          },
          {
            "code" : "82300-5",
            "display" : "Shigella sp [Presence] in Stool by Culture"
          },
          {
            "code" : "85827-4",
            "display" : "Carbapenem resistance bla OXA-48-like gene [Presence] by Molecular method"
          },
          {
            "code" : "97513-6",
            "display" : "Campylobacter sp [Presence] in Specimen by Organism specific culture"
          }
        ]
      }
    ]
  }
}