CH ELM (R4)
1.3.1 - release Switzerland flag

This page is part of the Observations of notifiable communicable infectious diseases (v1.3.1: Release) based on FHIR (HL7® FHIR® Standard) R4. This is the current published version in its permanent home (it will always be available at this URL). For a full list of available versions, see the Directory of published versions

ValueSet: CH ELM Expecting Organism Specification

Official URL: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-expecting-organism-specification Version: 1.3.1
Active as of 2024-06-17 Computable Name: ChElmExpectingOrganismSpecification

Copyright/Legal: CC0-1.0

This CH ELM value set includes the leading codes for the laboratory test results, which have to be completed by another code for the expecting organism.

References

This value set is not used here; it may be used elsewhere (e.g. specifications and/or implementations that use this content)

Logical Definition (CLD)

 

Expansion

Expansion based on Loinc v2.77

This value set contains 21 concepts

CodeSystemDisplayCH ELM Expecting Organism Specification To Results Completion Vs
  100911-7http://loinc.orgCampylobacter sp [Presence] in Stool by Organism specific culture?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-camp-org
  101219-4http://loinc.orgLegionella sp DNA [Presence] in Specimen by NAA with probe detection?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-leg-org
  101427-3http://loinc.orgShigella sp DNA [Presence] in Stool by NAA with probe detection?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-shi-org
  26621-3http://loinc.orgLegionella sp Ag [Presence] in Specimen?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-leg-org
  32781-7http://loinc.orgLegionella sp Ag [Presence] in Urine?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-leg-org
  38394-3http://loinc.orgLegionella sp identified in Urine by Organism specific culture?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-leg-org
  46454-5http://loinc.orgShigella sp [Presence] in Specimen by Organism specific culture?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-shi-org
  46455-2http://loinc.orgShigella sp DNA [Presence] in Specimen by NAA with probe detection?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-shi-org
  47085-6http://loinc.orgPlasmodium sp DNA [Presence] in Blood by NAA with probe detection?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-mal-org
  49614-1http://loinc.orgCampylobacter sp DNA [Identifier] in Specimen by NAA with probe detection?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-camp-org
  4992-4http://loinc.orgCampylobacter sp rRNA [Presence] in Specimen by Probe?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-camp-org
  50687-3http://loinc.orgPlasmodium sp Ag [Presence] in Blood?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-mal-org
  51587-4http://loinc.orgPlasmodium sp [Presence] in Blood by Light microscopy?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-mal-org
  589-2http://loinc.orgLegionella sp identified in Bronchial specimen by Organism specific culture?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-leg-org
  590-0http://loinc.orgLegionella sp identified in Sputum by Organism specific culture?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-leg-org
  593-4http://loinc.orgLegionella sp identified in Specimen by Organism specific culture?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-leg-org
  70569-9http://loinc.orgPlasmodium sp Ag [Identifier] in Blood by Rapid immunoassay?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-mal-org
  71429-5http://loinc.orgCampylobacter sp DNA.diarrheagenic [Presence] in Stool by NAA with probe detection?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-camp-diar-org
  82300-5http://loinc.orgShigella sp [Presence] in Stool by Culture?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-shi-org
  85827-4http://loinc.orgCarbapenem resistance bla OXA-48-like gene [Presence] by Molecular method?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-cpe-org
  97513-6http://loinc.orgCampylobacter sp [Presence] in Specimen by Organism specific culture?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-camp-org

Explanation of the columns that may appear on this page:

Level A few code lists that FHIR defines are hierarchical - each code is assigned a level. In this scheme, some codes are under other codes, and imply that the code they are under also applies
System The source of the definition of the code (when the value set draws in codes defined elsewhere)
Code The code (used as the code in the resource instance)
Display The display (used in the display element of a Coding). If there is no display, implementers should not simply display the code, but map the concept into their application
Definition An explanation of the meaning of the concept
Comments Additional notes about how to use the code