ch-elm-expecting-organism-specification-to-results-completion-vs
type: ConceptMap
node role: treeRoot
id:
  v: ch-elm-expecting-organism-specification-to-results-completion-vs
text:
  status:
    v: generated
  div: Generated Narrative: ConceptMap ch-elm-expecting-organism-specification-to-results-completion-vs Mapping from CH ELM Expecting Organism Specification to CH ELM Results Completion Vs Group 1 Mapping from Logical Observation Identifiers, Names and Codes (LOINC) to CH ELM Results Completion Vs Source Code Relationship Target Code 100911-7 (Campylobacter sp [Presence] in Stool by Organism specific culture) is related to http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-camp-org 101003-2 (Monkeypox virus clade [Type] in Specimen by Sequencing) is related to http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-mpox-org 101219-4 (Legionella sp DNA [Presence] in Specimen by NAA with probe detection) is related to http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-leg-org 104376-9 (Diphtheria toxin DNA [Presence] in Specimen by NAA with probe detection) is related to http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-diph-org 14357-8 (Microscopic observation [Identifier] in Cerebral spinal fluid by Gram stain) is related to http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-men-org 17563-8 (Salmonella sp identified in Specimen by Organism specific culture) is related to http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-sal-org 22826-2 (Influenza virus A identified in Specimen by Bioassay) is related to http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-influenza-hxny-org 24102-6 (Corynebacterium toxin [Presence] in Specimen by Immune diffusion (ID)) is related to http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-diph-org 32781-7 (Legionella sp Ag [Presence] in Urine) is related to http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-leg-org 38353-9 (Streptococcus sp identified in Specimen by Organism specific culture) is related to http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-pneu-org 39025-2 (Influenza virus A hemagglutinin cDNA [Identifier] in Specimen by Sequencing) is related to http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-influenza-hxny-org 41625-5 (Brucella sp DNA [Identifier] in…
url:
  v: http://fhir.ch/ig/ch-elm/ConceptMap/ch-elm-expecting-organism-specification-to-results-completion-vs
version:
  v: 1.11.0
name:
  v: ChElmExpectingOrganismSpecificationToResultsCompletionVs
title:
  v: CH ELM Expecting Organism Specification To Results Completion Vs
status:
  v: active
experimental:
  v: false
date:
  v: 2025-08-13T07:08:59+00:00
publisher:
  v: Federal Office of Public Health FOPH
contact:
  name:
    v: Federal Office of Public Health FOPH
  telecom:
    system:
      v: url
    value:
      v: https://www.bag.admin.ch/bag/en/home/das-bag/kontakt-standort.html
description:
  v: This CH ELM concept map shows which leading codes have to be completed by an additional code to specify the organism. The target code shows the URL of the value set containing the permitted codes for the organism specification.
jurisdiction:
  coding:
    system:
      v: urn:iso:std:iso:3166
    code:
      v: CH
copyright:
  v: CC0-1.0
source: canonical
  v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-expecting-organism-specification
  link: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-expecting-organism-specification
target: canonical
  v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-completion-vs
  link: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-completion-vs
group:
  source:
    v: http://loinc.org
  target:
    v: http://fhir.ch/ig/ch-elm/CodeSystem/ch-elm-results-completion-vs
  element:
    code:
      v: 100911-7
    display:
      v: Campylobacter sp [Presence] in Stool by Organism specific culture
    target:
      code:
        v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-camp-org
      equivalence:
        v: relatedto
  element:
    code:
      v: 101003-2
    display:
      v: Monkeypox virus clade [Type] in Specimen by Sequencing
    target:
      code:
        v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-mpox-org
      equivalence:
        v: relatedto
  element:
    code:
      v: 101219-4
    display:
      v: Legionella sp DNA [Presence] in Specimen by NAA with probe detection
    target:
      code:
        v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-leg-org
      equivalence:
        v: relatedto
  element:
    code:
      v: 104376-9
    display:
      v: Diphtheria toxin DNA [Presence] in Specimen by NAA with probe detection
    target:
      code:
        v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-diph-org
      equivalence:
        v: relatedto
  element:
    code:
      v: 14357-8
    display:
      v: Microscopic observation [Identifier] in Cerebral spinal fluid by Gram stain
    target:
      code:
        v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-men-org
      equivalence:
        v: relatedto
  element:
    code:
      v: 17563-8
    display:
      v: Salmonella sp identified in Specimen by Organism specific culture
    target:
      code:
        v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-sal-org
      equivalence:
        v: relatedto
  element:
    code:
      v: 22826-2
    display:
      v: Influenza virus A identified in Specimen by Bioassay
    target:
      code:
        v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-influenza-hxny-org
      equivalence:
        v: relatedto
  element:
    code:
      v: 24102-6
    display:
      v: Corynebacterium toxin [Presence] in Specimen by Immune diffusion (ID)
    target:
      code:
        v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-diph-org
      equivalence:
        v: relatedto
  element:
    code:
      v: 32781-7
    display:
      v: Legionella sp Ag [Presence] in Urine
    target:
      code:
        v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-leg-org
      equivalence:
        v: relatedto
  element:
    code:
      v: 38353-9
    display:
      v: Streptococcus sp identified in Specimen by Organism specific culture
    target:
      code:
        v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-pneu-org
      equivalence:
        v: relatedto
  element:
    code:
      v: 39025-2
    display:
      v: Influenza virus A hemagglutinin cDNA [Identifier] in Specimen by Sequencing
    target:
      code:
        v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-influenza-hxny-org
      equivalence:
        v: relatedto
  element:
    code:
      v: 41625-5
    display:
      v: Brucella sp DNA [Identifier] in Specimen by NAA with probe detection
    target:
      code:
        v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-bru-org
      equivalence:
        v: relatedto
  element:
    code:
      v: 43389-6
    display:
      v: Streptococcus sp identified in Isolate by Organism specific culture
    target:
      code:
        v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-pneu-org
      equivalence:
        v: relatedto
  element:
    code:
      v: 46454-5
    display:
      v: Shigella sp [Presence] in Specimen by Organism specific culture
    target:
      code:
        v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-shi-org
      equivalence:
        v: relatedto
  element:
    code:
      v: 46732-4
    display:
      v: Francisella tularensis subtype [Identifier] in Specimen by NAA with probe detection
    target:
      code:
        v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-tul-org
      equivalence:
        v: relatedto

code:
  v: 47085-6
display:
  v: Plasmodium sp DNA [Presence] in Blood by NAA with probe detection
target:
  code:
    v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-mal-org
  equivalence:
    v: relatedto

code:
  v: 49612-5
display:
  v: Salmonella sp DNA [Presence] in Specimen by NAA with probe detection
target:
  code:
    v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-sal-org
  equivalence:
    v: relatedto

code:
  v: 50687-3
display:
  v: Plasmodium sp Ag [Presence] in Blood
target:
  code:
    v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-mal-org
  equivalence:
    v: relatedto

code:
  v: 50697-2
display:
  v: Influenza virus A Ag [Identifier] in Isolate
target:
  code:
    v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-influenza-hxny-org
  equivalence:
    v: relatedto

code:
  v: 51587-4
display:
  v: Plasmodium sp [Presence] in Blood by Light microscopy
target:
  code:
    v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-mal-org
  equivalence:
    v: relatedto

code:
  v: 534-8
display:
  v: Mycobacterium sp identified in Cerebral spinal fluid by Organism specific culture
target:
  code:
    v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-tub-org
  equivalence:
    v: relatedto

code:
  v: 539-7
display:
  v: Mycobacterium sp identified in Sputum by Organism specific culture
target:
  code:
    v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-tub-org
  equivalence:
    v: relatedto

code:
  v: 540-5
display:
  v: Mycobacterium sp identified in Tissue by Organism specific culture
target:
  code:
    v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-tub-org
  equivalence:
    v: relatedto

code:
  v: 541-3
display:
  v: Mycobacterium sp identified in Urine by Organism specific culture
target:
  code:
    v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-tub-org
  equivalence:
    v: relatedto

code:
  v: 543-9
display:
  v: Mycobacterium sp identified in Specimen by Organism specific culture
target:
  code:
    v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-tub-org
  equivalence:
    v: relatedto

code:
  v: 552-0
display:
  v: Brucella sp identified in Specimen by Organism specific culture
target:
  code:
    v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-bru-org
  equivalence:
    v: relatedto

code:
  v: 58473-0
display:
  v: Haemophilus influenzae serotype DNA [Identifier] in Specimen by NAA with probe detection
target:
  code:
    v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-haem-org
  equivalence:
    v: relatedto

code:
  v: 589-2
display:
  v: Legionella sp identified in Bronchial specimen by Organism specific culture
target:
  code:
    v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-leg-org
  equivalence:
    v: relatedto

code:
  v: 590-0
display:
  v: Legionella sp identified in Sputum by Organism specific culture
target:
  code:
    v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-leg-org
  equivalence:
    v: relatedto

code:
  v: 593-4
display:
  v: Legionella sp identified in Specimen by Organism specific culture
target:
  code:
    v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-leg-org
  equivalence:
    v: relatedto

code:
  v: 59423-4
display:
  v: Influenza virus A hemagglutinin type RNA [Identifier] in Specimen by NAA with probe detection
target:
  code:
    v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-influenza-hxny-org
  equivalence:
    v: relatedto

code:
  v: 60422-3
display:
  v: Measles virus genotype [Identifier] in Specimen by NAA with probe detection
target:
  code:
    v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-mea-org
  equivalence:
    v: relatedto

code:
  v: 65756-9
display:
  v: Salmonella sp serovar [Type] in Isolate
target:
  code:
    v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-sal-org-complete
  equivalence:
    v: relatedto

code:
  v: 6578-9
display:
  v: Vibrio sp identified in Blood by Organism specific culture
target:
  code:
    v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-chol-org
  equivalence:
    v: relatedto

code:
  v: 6579-7
display:
  v: Vibrio sp identified in Stool by Organism specific culture
target:
  code:
    v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-chol-org
  equivalence:
    v: relatedto

code:
  v: 6581-3
display:
  v: Vibrio sp identified in Specimen by Organism specific culture
target:
  code:
    v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-chol-org
  equivalence:
    v: relatedto

code:
  v: 6584-7
display:
  v: Virus identified in Specimen by Culture
target:
  code:
    v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-virus-cult-org
  equivalence:
    v: relatedto

code:
  v: 6600-1
display:
  v: Haemophilus sp identified in Specimen by Organism specific culture
target:
  code:
    v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-haem-org
  equivalence:
    v: relatedto

code:
  v: 6604-3
display:
  v: Influenza virus identified in Specimen by Organism specific culture
target:
  code:
    v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-influenza-hxny-org
  equivalence:
    v: relatedto

code:
  v: 6609-2
display:
  v: Listeria sp identified in Specimen by Organism specific culture
target:
  code:
    v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-lis-org
  equivalence:
    v: relatedto

code:
  v: 70569-9
display:
  v: Plasmodium sp Ag [Identifier] in Blood by Rapid immunoassay
target:
  code:
    v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-mal-org
  equivalence:
    v: relatedto

code:
  v: 74037-3
display:
  v: Transmissible spongiform encephalopathy [Identifier] in Brain by Light microscopy
target:
  code:
    v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-cjd-org
  equivalence:
    v: relatedto

code:
  v: 75756-7
display:
  v: Bacteria identified in Isolate by MS.MALDI-TOF
target:
  code:
    v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-maldi-tof-org
  equivalence:
    v: relatedto

code:
  v: 7899-8
display:
  v: Hantavirus RNA [Presence] in Serum by NAA with probe detection
target:
  code:
    v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-hanta-org
  equivalence:
    v: relatedto

code:
  v: 82300-5
display:
  v: Shigella sp [Presence] in Stool by Culture
target:
  code:
    v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-shi-org
  equivalence:
    v: relatedto

code:
  v: 82301-3
display:
  v: Salmonella sp [Presence] in Stool by Culture
target:
  code:
    v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-sal-org
  equivalence:
    v: relatedto

code:
  v: 86520-4
display:
  v: Hantavirus RNA [Presence] in Blood by NAA with probe detection
target:
  code:
    v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-hanta-org
  equivalence:
    v: relatedto

code:
  v: 88585-5
display:
  v: Legionella sp identified in Lower respiratory specimen by Organism specific culture
target:
  code:
    v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-leg-org
  equivalence:
    v: relatedto

code:
  v: 88588-9
display:
  v: Legionella sp DNA [Identifier] in Lower respiratory specimen by NAA with probe detection
target:
  code:
    v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-leg-org
  equivalence:
    v: relatedto

code:
  v: 90066-2
display:
  v: Corynebacterium sp identified in Isolate by Organism specific culture
target:
  code:
    v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-diph-org
  equivalence:
    v: relatedto

code:
  v: 92786-3
display:
  v: Corynebacterium sp DNA [Presence] by NAA with probe detection in Positive blood culture
target:
  code:
    v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-diph-org
  equivalence:
    v: relatedto

code:
  v: 93385-3
display:
  v: Salmonella sp DNA [Presence] by NAA with probe detection in Positive blood culture
target:
  code:
    v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-sal-org
  equivalence:
    v: relatedto

code:
  v: 97313-1
display:
  v: Salmonella sp DNA [Presence] in Stool by NAA with probe detection
target:
  code:
    v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-sal-org
  equivalence:
    v: relatedto

code:
  v: 97513-6
display:
  v: Campylobacter sp [Presence] in Specimen by Organism specific culture
target:
  code:
    v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-camp-org
  equivalence:
    v: relatedto

code:
  v: 9823-6
display:
  v: Mycobacterium sp identified in Bronchial specimen by Organism specific culture
target:
  code:
    v: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-tub-org
  equivalence:
    v: relatedto