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FHIR to CDA types - JSON Representation
Source view
{
"resourceType" : "StructureMap",
"id" : "FhirToCdaTypes",
"text" : {
"status" : "generated",
"div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\">\n <pre>map "http://fhir.ch/ig/cda-fhir-maps/StructureMap/FhirToCdaTypes" = "FhirToCdaTypes"\n\n// Adapted from https://github.com/HL7/ccda-to-fhir/tree/master/mappings\n// CDA: http://build.fhir.org/ig/ahdis/cda-core-2.0/branches/master/index.html\n// FHIR: http://hl7.org/fhir/r4/\n\nconceptmap "uri2oid" {\n prefix s = "http://hl7.org/fhir"\n prefix t = "http://hl7.org/cda"\n\n s:"http://snomed.info/sct" == t:"2.16.840.1.113883.6.96"\n s:"http://loinc.org" == t:"2.16.840.1.113883.6.1"\n s:"http://hl7.org/fhir/sid/atc" == t:"2.16.840.1.113883.6.73"\n s:"http://www.whocc.no/atc" == t:"2.16.840.1.113883.6.73"\n s:"http://terminology.hl7.org/CodeSystem/v3-substanceAdminSubstitution" == t:"2.16.840.1.113883.5.1070"\n}\n\nconceptmap "uri2system" {\n prefix s = "http://hl7.org/fhir"\n prefix t = "http://hl7.org/cda"\n\n s:"http://snomed.info/sct" == t:"SNOMED CT"\n s:"http://loinc.org" == t:LOINC\n s:"http://hl7.org/fhir/sid/atc" == t:"ATC WHO"\n s:"http://www.whocc.no/atc" == t:"ATC WHO"\n s:"http://terminology.hl7.org/CodeSystem/v3-substanceAdminSubstitution" == t:"HL7 Substance Admin Substitution"\n}\n\nconceptmap "oid2system" {\n prefix s = "http://hl7.org/fhir"\n prefix t = "http://hl7.org/cda"\n\n s:"urn:oid:2.51.1.1" == t:GTIN\n s:"urn:oid:1.3.6.1.4.1.19376.1.9.2.1" == t:"IHE Pharmaceutical Advice Status List"\n}\n\nconceptmap "addressUse" {\n prefix s = "http://hl7.org/fhir/valueset-address-use.html"\n prefix t = "http://terminology.hl7.org/ValueSet/v3-AddressUse"\n\n s:home == t:H\n s:work == t:WP\n s:temp == t:TMP\n s:old == t:OLD\n}\n\nuses "http://hl7.org/fhir/StructureDefinition/Identifier" as source\nuses "http://hl7.org/fhir/cda/StructureDefinition/II" as target\n\ngroup Any(source src, target tgt) {\n src.extension as extension where $this.url = 'http://hl7.org/fhir/StructureDefinition/iso21090-nullFlavor' -> tgt.nullFlavor as nullFlavor then {\n extension.valueCode as valueCode then {\n valueCode.value as v -> nullFlavor.value = cast(v, 'string');\n } "nullFlavor";\n };\n}\n\ngroup IdentifierII(source src : Identifier, target tgt : II) extends Any <<types>> {\n src.value as value where src.system.empty() and src.value.startsWith('urn:uuid:') -> tgt.root = (value.substring(9).upper()) "idAsUuid";\n src.value as value where src.system = 'urn:ietf:rfc:3986' -> tgt.root = (value.substring(9).upper()) "idAsUuid";\n src.value as value where src.system.startsWith('urn:oid:') then {\n src.system as system -> tgt.root = (system.substring(8)), tgt.extension = value "oidident";\n } "system";\n}\n\ngroup IntegerINT(source src : integer, target tgt : INT) extends Any <<types>> {\n src.value as v -> tgt.value = v "integer";\n}\n\n// group Identifier(source src : Identifier, target tgt : II) extends Any <<types>> {\n// src.system as system then {\n// src.value as value then {\n// value.value as v where system.value = 'urn:ietf:rfc:3986' -> tgt.root = cast(v, 'string') "noExtension";\n// system.value as v where system.value != 'urn:ietf:rfc:3986' -> tgt.root = v then {\n// value.value as val -> tgt.extension = cast(val, 'string') "extension";\n// } "withExtension";\n// } "rootValue";\n// } "root";\n// src.value as value -> tgt.root = '123' "test";\n// src -> tgt.root = '123' "test";\n// src.assigner as a then {\n// a.display as display then {\n// display.value as val -> tgt.assigningAuthorityName = cast(val, 'string');\n// } "display";\n// } "assigner";\n// src.extension as ext where ext.url = 'http://hl7.org/fhir/cdaStructureDefinition/extension-displayable' -> tgt.displayable as displayable then {\n// ext.value as v -> displayable.value = cast(v, 'string');\n// } "displayable";\n// }\ngroup InstantTS(source src : instant, target tgt : TS) extends Any <<types>> {\n src.value as v -> tgt.value = v "copy";\n}\n\ngroup DateTimeTS(source src : dateTime, target tgt : TS) extends InstantTS <<types>> {\n}\n\ngroup DateTS(source src : date, target tgt : TS) extends InstantTS <<types>> {\n}\n\ngroup CodeCS(source src : code, target tgt : CS) extends Any <<types>> {\n src.code as c -> tgt.value = cast(c, 'string');\n}\n\ngroup CodeCE(source src : code, target tgt : CE) extends CodeCS <<types>> {\n}\n\ngroup CodeCD(source src : code, target tgt : CD) extends CodeCS <<types>> {\n}\n\ngroup CodingCE(source src : Coding, target tgt : CE) extends Any <<types>> {\n src.code as code -> tgt.code = code;\n src.system as system where $this.startsWith('http:') -> tgt.codeSystem = translate(system, '#uri2oid', 'code');\n src.system as system where $this.startsWith('urn:oid:') then {\n src.system as system -> tgt.codeSystem = (system.substring(8)) "oidident";\n };\n src.system as system where $this.startsWith('http:') -> tgt.codeSystemName = translate(system, '#uri2system', 'code') "systemName1";\n src.system as system where $this.startsWith('urn:oid:') -> tgt.codeSystemName = translate(system, '#oid2system', 'code') "systemName2";\n src.display as display -> tgt.displayName = display;\n}\n\ngroup CodeableConceptCE(source src : CodeableConcept, target tgt : CE) extends Any <<types>> {\n src.text as text -> tgt.orginialText as originalText, originalText.data = text;\n src.coding first as coding then CodingCE(coding, tgt) "first";\n src.coding not_first as coding -> tgt.translation as translation then CodingCE(coding, translation) "translation";\n}\n\n// group CECodeableConcept(source src : CE, target tgt : CodeableConcept) extends Any <<types>> {\n// src.originalText -> tgt.text;\n// src -> tgt.coding as coding then {\n// src.code as code -> coding.code = cast(code, 'string');\n// src.codeSystem as system -> coding.system = translate(system, 'http://hl7.org/fhir/ConceptMap/special-oid2uri', 'uri');\n// src.displayName as display -> coding.display = cast(display, 'string');\n// } "code";\n// src.translation as translation -> tgt.coding as coding then {\n// translation.code as code -> coding.code = cast(code, 'string');\n// translation.codeSystem as system -> coding.system = translate(system, 'http://hl7.org/fhir/ConceptMap/special-oid2uri', 'uri');\n// translation.displayName as display -> coding.display = cast(display, 'string');\n// } "translation";\n// }\n// group CSCodeableConcept(source src : CS, target tgt : CodeableConcept) extends CECodeableConcept <<types>> {\n// }\n// group CDCodeableConcept(source src : CD, target tgt : CodeableConcept) extends CECodeableConcept <<types>> {\n// }\ngroup AddressAD(source src : Address, target tgt : AD) extends Any <<types>> {\n src.line as v -> tgt.streetAddressLine as line, line.data = v "streetAddress";\n src.postalCode as v -> tgt.postalCode as postalCode, postalCode.data = v;\n src.city as v -> tgt.city as city, city.data = v;\n src.state as v -> tgt.state as state, state.data = v;\n src.district as v -> tgt.county as county, county.data = v;\n src.country as v -> tgt.country as country, country.data = v;\n src.use as c -> tgt.use = translate(c, '#addressUse', 'code') "addressUse";\n}\n\ngroup ContactPointTEL(source src : ContactPoint, target tgt : TEL) extends Any <<types>> {\n src.value as value -> tgt.value = (iif(%src.system = 'phone', 'tel:', '') + iif(%src.system = 'fax', 'fax:', '') + iif(%src.system = 'email', 'mailto:', '') + iif(%src.system = 'url', 'http:', '') + value);\n src.use as use where $this = 'home' -> tgt.use = 'HP';\n src.use as use where $this = 'work' -> tgt.use = 'WP';\n // not complete see below\n src.use as use where $this = 'old' -> tgt.use = 'BAD';\n src.use as use where $this = 'temp' -> tgt.use = 'TMP';\n src.use as use where $this = 'mobile' -> tgt.use = 'MC';\n}\n\ngroup HumanNameEN(source src : HumanName, target tgt : EN) extends Any <<types>> {\n src.family as v -> tgt.family as family, family.data = v;\n src.given as v -> tgt.given as given, given.data = v;\n src.prefix as v -> tgt.prefix as prefix, prefix.data = v;\n src.suffix as v -> tgt.suffix as suffix, suffix.data = v;\n}\n\ngroup QuantityPQ(source src : Quantity, target tgt : PQ) extends Any <<types>> {\n // src.code as code -> tgt.unit = code;\n src.unit as unit -> tgt.unit = unit;\n src.value as value -> tgt.value = value;\n}\n\ngroup RatioRTOPQPQ(source src : Ratio, target tgt : RTO_PQ_PQ) extends Any <<types>> {\n src.numerator as numerator -> tgt.numerator as targetNumerator then QuantityPQ(numerator, targetNumerator);\n src.denominator as denominator -> tgt.denominator as targetDenominator then QuantityPQ(denominator, targetDenominator);\n}\n\n</pre>\n </div>"
},
"contained" : [
{
"resourceType" : "ConceptMap",
"id" : "uri2oid",
"status" : "draft",
"group" : [
{
"source" : "http://hl7.org/fhir",
"target" : "http://hl7.org/cda",
"element" : [
{
"code" : "http://snomed.info/sct",
"target" : [
{
"code" : "2.16.840.1.113883.6.96",
"equivalence" : "equivalent"
}
]
},
{
"code" : "http://loinc.org",
"target" : [
{
"code" : "2.16.840.1.113883.6.1",
"equivalence" : "equivalent"
}
]
},
{
"code" : "http://hl7.org/fhir/sid/atc",
"target" : [
{
"code" : "2.16.840.1.113883.6.73",
"equivalence" : "equivalent",
"comment" : "see issue #4"
}
]
},
{
"code" : "http://www.whocc.no/atc",
"target" : [
{
"code" : "2.16.840.1.113883.6.73",
"equivalence" : "equivalent"
}
]
},
{
"code" : "http://terminology.hl7.org/CodeSystem/v3-substanceAdminSubstitution",
"target" : [
{
"code" : "2.16.840.1.113883.5.1070",
"equivalence" : "equivalent"
}
]
}
]
}
]
},
{
"resourceType" : "ConceptMap",
"id" : "uri2system",
"status" : "draft",
"group" : [
{
"source" : "http://hl7.org/fhir",
"target" : "http://hl7.org/cda",
"element" : [
{
"code" : "http://snomed.info/sct",
"target" : [
{
"code" : "SNOMED CT",
"equivalence" : "equivalent"
}
]
},
{
"code" : "http://loinc.org",
"target" : [
{
"code" : "LOINC",
"equivalence" : "equivalent"
}
]
},
{
"code" : "http://hl7.org/fhir/sid/atc",
"target" : [
{
"code" : "ATC WHO",
"equivalence" : "equivalent",
"comment" : "see issue #4"
}
]
},
{
"code" : "http://www.whocc.no/atc",
"target" : [
{
"code" : "ATC WHO",
"equivalence" : "equivalent"
}
]
},
{
"code" : "http://terminology.hl7.org/CodeSystem/v3-substanceAdminSubstitution",
"target" : [
{
"code" : "HL7 Substance Admin Substitution",
"equivalence" : "equivalent"
}
]
}
]
}
]
},
{
"resourceType" : "ConceptMap",
"id" : "oid2system",
"status" : "draft",
"group" : [
{
"source" : "http://hl7.org/fhir",
"target" : "http://hl7.org/cda",
"element" : [
{
"code" : "urn:oid:2.51.1.1",
"target" : [
{
"code" : "GTIN",
"equivalence" : "equivalent"
}
]
},
{
"code" : "urn:oid:1.3.6.1.4.1.19376.1.9.2.1",
"target" : [
{
"code" : "IHE Pharmaceutical Advice Status List",
"equivalence" : "equivalent"
}
]
}
]
}
]
},
{
"resourceType" : "ConceptMap",
"id" : "addressUse",
"status" : "draft",
"group" : [
{
"source" : "http://hl7.org/fhir/valueset-address-use.html",
"target" : "http://terminology.hl7.org/ValueSet/v3-AddressUse",
"element" : [
{
"code" : "home",
"target" : [
{
"code" : "H",
"equivalence" : "equivalent",
"comment" : "home -> home address"
}
]
},
{
"code" : "work",
"target" : [
{
"code" : "WP",
"equivalence" : "equivalent",
"comment" : "work -> work place"
}
]
},
{
"code" : "temp",
"target" : [
{
"code" : "TMP",
"equivalence" : "equivalent",
"comment" : "Temporary -> temporary address"
}
]
},
{
"code" : "old",
"target" : [
{
"code" : "OLD",
"equivalence" : "equivalent",
"comment" : "Old / Incorrect -> no longer in use, could be also t:\"BAD\" for bad address"
}
]
}
]
}
]
}
],
"extension" : [
{
"url" : "http://fhir.ch/reference",
"valueReference" : {
"reference" : "#uri2oid"
}
},
{
"url" : "http://fhir.ch/reference",
"valueReference" : {
"reference" : "#uri2system"
}
},
{
"url" : "http://fhir.ch/reference",
"valueReference" : {
"reference" : "#oid2system"
}
},
{
"url" : "http://fhir.ch/reference",
"valueReference" : {
"reference" : "#addressUse"
}
}
],
"url" : "http://fhir.ch/ig/cda-fhir-maps/StructureMap/FhirToCdaTypes",
"version" : "0.1.0",
"name" : "FhirToCdaTypes",
"status" : "draft",
"date" : "2020-12-09T15:16:13+01:00",
"publisher" : "ahdis",
"contact" : [
{
"name" : "ahdis",
"telecom" : [
{
"system" : "url",
"value" : "http://www.ahdis.ch/"
}
]
}
],
"description" : "Adapted from https://github.com/HL7/ccda-to-fhir/tree/master/mappings CDA: http://build.fhir.org/ig/ahdis/cda-core-2.0/branches/master/index.html FHIR: http://hl7.org/fhir/r4/",
"copyright" : "CC-BY-SA-4.0",
"structure" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/Identifier",
"mode" : "source"
},
{
"url" : "http://hl7.org/fhir/cda/StructureDefinition/II",
"mode" : "target"
}
],
"group" : [
{
"name" : "Any",
"typeMode" : "none",
"input" : [
{
"name" : "src",
"mode" : "source"
},
{
"name" : "tgt",
"mode" : "target"
}
],
"rule" : [
{
"name" : "extension",
"source" : [
{
"context" : "src",
"element" : "extension",
"variable" : "extension",
"condition" : "$this.url = 'http://hl7.org/fhir/StructureDefinition/iso21090-nullFlavor'"
}
],
"target" : [
{
"context" : "tgt",
"contextType" : "variable",
"element" : "nullFlavor",
"variable" : "nullFlavor"
}
],
"rule" : [
{
"name" : "nullFlavor",
"source" : [
{
"context" : "extension",
"element" : "valueCode",
"variable" : "valueCode"
}
],
"rule" : [
{
"name" : "value",
"source" : [
{
"context" : "valueCode",
"element" : "value",
"variable" : "v"
}
],
"target" : [
{
"context" : "nullFlavor",
"contextType" : "variable",
"element" : "value",
"transform" : "cast",
"parameter" : [
{
"valueId" : "v"
},
{
"valueString" : "string"
}
]
}
]
}
]
}
]
}
]
},
{
"name" : "IdentifierII",
"extends" : "Any",
"typeMode" : "types",
"input" : [
{
"name" : "src",
"type" : "Identifier",
"mode" : "source"
},
{
"name" : "tgt",
"type" : "II",
"mode" : "target"
}
],
"rule" : [
{
"name" : "idAsUuid",
"source" : [
{
"context" : "src",
"element" : "value",
"variable" : "value",
"condition" : "src.system.empty() and src.value.startsWith('urn:uuid:')"
}
],
"target" : [
{
"context" : "tgt",
"contextType" : "variable",
"element" : "root",
"transform" : "evaluate",
"parameter" : [
{
"valueString" : "value.substring(9).upper()"
}
]
}
]
},
{
"name" : "idAsUuid",
"source" : [
{
"context" : "src",
"element" : "value",
"variable" : "value",
"condition" : "src.system = 'urn:ietf:rfc:3986'"
}
],
"target" : [
{
"context" : "tgt",
"contextType" : "variable",
"element" : "root",
"transform" : "evaluate",
"parameter" : [
{
"valueString" : "value.substring(9).upper()"
}
]
}
]
},
{
"name" : "system",
"source" : [
{
"context" : "src",
"element" : "value",
"variable" : "value",
"condition" : "src.system.startsWith('urn:oid:')"
}
],
"rule" : [
{
"name" : "oidident",
"source" : [
{
"context" : "src",
"element" : "system",
"variable" : "system"
}
],
"target" : [
{
"context" : "tgt",
"contextType" : "variable",
"element" : "root",
"transform" : "evaluate",
"parameter" : [
{
"valueString" : "system.substring(8)"
}
]
},
{
"context" : "tgt",
"contextType" : "variable",
"element" : "extension",
"transform" : "copy",
"parameter" : [
{
"valueId" : "value"
}
]
}
]
}
]
}
]
},
{
"name" : "IntegerINT",
"extends" : "Any",
"typeMode" : "types",
"input" : [
{
"name" : "src",
"type" : "integer",
"mode" : "source"
},
{
"name" : "tgt",
"type" : "INT",
"mode" : "target"
}
],
"rule" : [
{
"name" : "integer",
"source" : [
{
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"element" : "value",
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}
],
"target" : [
{
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"element" : "value",
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}
]
}
]
}
]
},
{
"name" : "InstantTS",
"extends" : "Any",
"typeMode" : "types",
"documentation" : "group Identifier(source src : Identifier, target tgt : II) extends Any <<types>> { src.system as system then { src.value as value then { value.value as v where system.value = 'urn:ietf:rfc:3986' -> tgt.root = cast(v, 'string') \"noExtension\"; system.value as v where system.value != 'urn:ietf:rfc:3986' -> tgt.root = v then { value.value as val -> tgt.extension = cast(val, 'string') \"extension\"; } \"withExtension\"; } \"rootValue\"; } \"root\"; src.value as value -> tgt.root = '123' \"test\"; src -> tgt.root = '123' \"test\"; src.assigner as a then { a.display as display then { display.value as val -> tgt.assigningAuthorityName = cast(val, 'string'); } \"display\"; } \"assigner\"; src.extension as ext where ext.url = 'http://hl7.org/fhir/cdaStructureDefinition/extension-displayable' -> tgt.displayable as displayable then { ext.value as v -> displayable.value = cast(v, 'string'); } \"displayable\"; }",
"input" : [
{
"name" : "src",
"type" : "instant",
"mode" : "source"
},
{
"name" : "tgt",
"type" : "TS",
"mode" : "target"
}
],
"rule" : [
{
"name" : "copy",
"source" : [
{
"context" : "src",
"element" : "value",
"variable" : "v"
}
],
"target" : [
{
"context" : "tgt",
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"transform" : "copy",
"parameter" : [
{
"valueId" : "v"
}
]
}
]
}
]
},
{
"name" : "DateTimeTS",
"extends" : "InstantTS",
"typeMode" : "types",
"input" : [
{
"name" : "src",
"type" : "dateTime",
"mode" : "source"
},
{
"name" : "tgt",
"type" : "TS",
"mode" : "target"
}
]
},
{
"name" : "DateTS",
"extends" : "InstantTS",
"typeMode" : "types",
"input" : [
{
"name" : "src",
"type" : "date",
"mode" : "source"
},
{
"name" : "tgt",
"type" : "TS",
"mode" : "target"
}
]
},
{
"name" : "CodeCS",
"extends" : "Any",
"typeMode" : "types",
"input" : [
{
"name" : "src",
"type" : "code",
"mode" : "source"
},
{
"name" : "tgt",
"type" : "CS",
"mode" : "target"
}
],
"rule" : [
{
"name" : "code",
"source" : [
{
"context" : "src",
"element" : "code",
"variable" : "c"
}
],
"target" : [
{
"context" : "tgt",
"contextType" : "variable",
"element" : "value",
"transform" : "cast",
"parameter" : [
{
"valueId" : "c"
},
{
"valueString" : "string"
}
]
}
]
}
]
},
{
"name" : "CodeCE",
"extends" : "CodeCS",
"typeMode" : "types",
"input" : [
{
"name" : "src",
"type" : "code",
"mode" : "source"
},
{
"name" : "tgt",
"type" : "CE",
"mode" : "target"
}
]
},
{
"name" : "CodeCD",
"extends" : "CodeCS",
"typeMode" : "types",
"input" : [
{
"name" : "src",
"type" : "code",
"mode" : "source"
},
{
"name" : "tgt",
"type" : "CD",
"mode" : "target"
}
]
},
{
"name" : "CodingCE",
"extends" : "Any",
"typeMode" : "types",
"input" : [
{
"name" : "src",
"type" : "Coding",
"mode" : "source"
},
{
"name" : "tgt",
"type" : "CE",
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