CH ELM (R4)
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This page is part of the Observations of notifiable communicable infectious diseases (v1.7.0: Release) based on FHIR (HL7® FHIR® Standard) R4. This is the current published version in its permanent home (it will always be available at this URL). For a full list of available versions, see the Directory of published versions

: 7Doc - SARS-CoV-2 - JSON Representation

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{
  "resourceType" : "Bundle",
  "id" : "7Doc-SARSCoV2",
  "identifier" : {
    "system" : "urn:ietf:rfc:3986",
    "value" : "urn:uuid:1901332d-6012-443f-9690-9291adb2aa34"
  },
  "type" : "document",
  "timestamp" : "2023-09-12T08:30:00+02:00",
  "entry" : [
    {
      "fullUrl" : "http://test.fhir.ch/r4/Composition/7Comp-SARSCoV2",
      "resource" : {
        "resourceType" : "Composition",
        "id" : "7Comp-SARSCoV2",
        "language" : "fr-CH",
        "identifier" : {
          "system" : "urn:ietf:rfc:3986",
          "value" : "urn:uuid:1901332d-6012-443f-9690-9291adb2aa34"
        },
        "status" : "final",
        "type" : {
          "coding" : [
            {
              "system" : "http://snomed.info/sct",
              "version" : "http://snomed.info/sct/2011000195101",
              "code" : "4241000179101",
              "display" : "Laborbericht"
            },
            {
              "system" : "http://loinc.org",
              "code" : "11502-2",
              "display" : "Laboratory report"
            }
          ]
        },
        "subject" : {
          🔗 "reference" : "Patient/Pat-003"
        },
        "date" : "2023-09-12T08:30:00+02:00",
        "author" : [
          {
            🔗 "reference" : "Organization/1Org-Labor"
          }
        ],
        "title" : "Rapport de laboratoire du 12.09.2023",
        "section" : [
          {
            "title" : "Résultats de l'analyse microbiologique",
            "code" : {
              "coding" : [
                {
                  "system" : "http://loinc.org",
                  "code" : "18725-2",
                  "display" : "Microbiology studies (set)"
                }
              ]
            },
            "entry" : [
              {
                "reference" : "Observation/7Obs-SARSCoV2"
              }
            ]
          }
        ]
      }
    },
    {
      "fullUrl" : "http://test.fhir.ch/r4/DiagnosticReport/7DR-SARSCoV2",
      "resource" : {
        "resourceType" : "DiagnosticReport",
        "id" : "7DR-SARSCoV2",
        "extension" : [
          {
            "url" : "http://hl7.org/fhir/5.0/StructureDefinition/extension-DiagnosticReport.composition",
            "valueReference" : {
              "reference" : "Composition/7Comp-SARSCoV2"
            }
          }
        ],
        "identifier" : [
          {
            "system" : "urn:ietf:rfc:3986",
            "value" : "urn:uuid:1901332d-6012-443f-9690-9291adb2aa34"
          }
        ],
        "basedOn" : [
          {
            "reference" : "ServiceRequest/7SR-Order"
          }
        ],
        "status" : "final",
        "code" : {
          "coding" : [
            {
              "system" : "http://loinc.org",
              "code" : "11502-2",
              "display" : "Laboratory report"
            }
          ]
        },
        "subject" : {
          🔗 "reference" : "Patient/Pat-003"
        },
        "performer" : [
          {
            🔗 "reference" : "Organization/1Org-Labor"
          }
        ],
        "specimen" : [
          {
            "reference" : "Specimen/7Spec-Specimen"
          }
        ],
        "result" : [
          {
            "reference" : "Observation/7Obs-SARSCoV2"
          }
        ]
      }
    },
    {
      "fullUrl" : "http://test.fhir.ch/r4/Patient/Pat-003",
      "resource" : {
        "resourceType" : "Patient",
        "id" : "Pat-003",
        "identifier" : [
          {
            "system" : "urn:oid:2.16.756.5.32",
            "value" : "7561234567866"
          }
        ],
        "name" : [
          {
            "family" : "Dupont",
            "given" : [
              "Antoine"
            ]
          }
        ],
        "telecom" : [
          {
            "system" : "phone",
            "value" : "+41 76 222 55 22"
          }
        ],
        "gender" : "female",
        "birthDate" : "1981-02-07",
        "address" : [
          {
            "use" : "home",
            "line" : [
              "Rue de la république 10"
            ],
            "_line" : [
              {
                "extension" : [
                  {
                    "url" : "http://hl7.org/fhir/StructureDefinition/iso21090-ADXP-streetName",
                    "valueString" : "Rue de la république"
                  },
                  {
                    "url" : "http://hl7.org/fhir/StructureDefinition/iso21090-ADXP-houseNumber",
                    "valueString" : "10"
                  }
                ]
              }
            ],
            "city" : "Carouge",
            "state" : "GE",
            "postalCode" : "1227",
            "country" : "CH",
            "_country" : {
              "extension" : [
                {
                  "url" : "http://hl7.org/fhir/StructureDefinition/iso21090-SC-coding",
                  "valueCoding" : {
                    "system" : "urn:iso:std:iso:3166",
                    "code" : "CH"
                  }
                }
              ]
            }
          }
        ]
      }
    },
    {
      "fullUrl" : "http://test.fhir.ch/r4/Observation/7Obs-SARSCoV2",
      "resource" : {
        "resourceType" : "Observation",
        "id" : "7Obs-SARSCoV2",
        "status" : "final",
        "category" : [
          {
            "coding" : [
              {
                "system" : "http://terminology.hl7.org/CodeSystem/observation-category",
                "code" : "laboratory",
                "display" : "Laboratory"
              }
            ]
          }
        ],
        "code" : {
          "coding" : [
            {
              "system" : "http://loinc.org",
              "code" : "94500-6",
              "display" : "SARS-CoV-2 (COVID-19) RNA [Presence] in Respiratory system specimen by NAA with probe detection"
            }
          ]
        },
        "subject" : {
          🔗 "reference" : "Patient/Pat-003"
        },
        "effectiveDateTime" : "2023-09-12T07:40:00+02:00",
        "performer" : [
          {
            🔗 "reference" : "Organization/1Org-Labor"
          }
        ],
        "valueCodeableConcept" : {
          "coding" : [
            {
              "system" : "http://snomed.info/sct",
              "code" : "10828004",
              "display" : "Positive"
            }
          ]
        },
        "interpretation" : [
          {
            "coding" : [
              {
                "system" : "http://terminology.hl7.org/CodeSystem/v3-ObservationInterpretation",
                "code" : "POS",
                "display" : "Positive"
              }
            ]
          }
        ],
        "specimen" : {
          "reference" : "Specimen/7Spec-Specimen"
        }
      }
    },
    {
      "fullUrl" : "http://test.fhir.ch/r4/Specimen/7Spec-Specimen",
      "resource" : {
        "resourceType" : "Specimen",
        "id" : "7Spec-Specimen",
        "type" : {
          "text" : "Material declared by Observation.code or non-mandatory"
        },
        "subject" : {
          🔗 "reference" : "Patient/Pat-003"
        },
        "collection" : {
          "collectedDateTime" : "2023-09-11"
        }
      }
    },
    {
      "fullUrl" : "http://test.fhir.ch/r4/ServiceRequest/7SR-Order",
      "resource" : {
        "resourceType" : "ServiceRequest",
        "id" : "7SR-Order",
        "identifier" : [
          {
            "value" : "28541215633"
          }
        ],
        "status" : "completed",
        "intent" : "order",
        "code" : {
          "coding" : [
            {
              "system" : "http://loinc.org",
              "code" : "94500-6",
              "display" : "SARS-CoV-2 (COVID-19) RNA [Presence] in Respiratory specimen by NAA with probe detection"
            }
          ]
        },
        "subject" : {
          🔗 "reference" : "Patient/Pat-003"
        },
        "requester" : {
          🔗 "reference" : "PractitionerRole/PR-JeanneMoreau"
        },
        "specimen" : [
          {
            "reference" : "Specimen/7Spec-Specimen"
          }
        ]
      }
    },
    {
      "fullUrl" : "http://test.fhir.ch/r4/Organization/1Org-Labor",
      "resource" : {
        "resourceType" : "Organization",
        "id" : "1Org-Labor",
        "identifier" : [
          {
            "system" : "urn:oid:2.51.1.3",
            "value" : "7601002331470"
          }
        ],
        "name" : "SanLab"
      }
    },
    {
      "fullUrl" : "http://test.fhir.ch/r4/PractitionerRole/PR-JeanneMoreau",
      "resource" : {
        "resourceType" : "PractitionerRole",
        "id" : "PR-JeanneMoreau",
        "practitioner" : {
          🔗 "reference" : "Practitioner/Pract-JeanneMoreau"
        },
        "organization" : {
          🔗 "reference" : "Organization/Org-JeanneMoreau"
        }
      }
    },
    {
      "fullUrl" : "http://test.fhir.ch/r4/Practitioner/Pract-JeanneMoreau",
      "resource" : {
        "resourceType" : "Practitioner",
        "id" : "Pract-JeanneMoreau",
        "identifier" : [
          {
            "system" : "urn:oid:2.51.1.3",
            "value" : "7601000121219"
          }
        ],
        "name" : [
          {
            "family" : "Moreau",
            "given" : [
              "Jeanne"
            ]
          }
        ],
        "telecom" : [
          {
            "system" : "email",
            "value" : "jm@hr-soleil.ch"
          },
          {
            "system" : "phone",
            "value" : "+41 79 111 88 99"
          }
        ]
      }
    },
    {
      "fullUrl" : "http://test.fhir.ch/r4/Organization/Org-JeanneMoreau",
      "resource" : {
        "resourceType" : "Organization",
        "id" : "Org-JeanneMoreau",
        "extension" : [
          {
            "url" : "http://fhir.ch/ig/ch-elm/StructureDefinition/ch-elm-ext-department",
            "valueString" : "Médecine interne"
          }
        ],
        "identifier" : [
          {
            "system" : "urn:oid:2.16.756.5.45",
            "value" : "A99086638"
          }
        ],
        "name" : "Hôpital régional soleil",
        "address" : [
          {
            "line" : [
              "Rue des alpes 35"
            ],
            "_line" : [
              {
                "extension" : [
                  {
                    "url" : "http://hl7.org/fhir/StructureDefinition/iso21090-ADXP-streetName",
                    "valueString" : "Rue des alpes"
                  },
                  {
                    "url" : "http://hl7.org/fhir/StructureDefinition/iso21090-ADXP-houseNumber",
                    "valueString" : "35"
                  }
                ]
              }
            ],
            "city" : "Genève",
            "postalCode" : "1202"
          }
        ]
      }
    }
  ]
}