CH ELM (R4)
1.1.1 - draft Switzerland flag

This page is part of the Observations of notifiable communicable infectious diseases (v1.1.1: STU 1 Draft) based on FHIR (HL7® FHIR® Standard) R4. This is the current published version in its permanent home (it will always be available at this URL). For a full list of available versions, see the Directory of published versions

ValueSet: CH ELM Results Laboratory Observation

Official URL: http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-results-laboratory-observation Version: 1.1.1
Active as of 2024-02-27 Computable Name: ChElmResultsLaboratoryObservation

Copyright/Legal: CC0-1.0

This CH ELM value set includes the codes for the laboratory test results (organism).

References

Logical Definition (CLD)

This value set includes codes based on the following rules:

 

Expansion

Expansion based on:

  • Loinc v2.74
  • SNOMED CT International edition 01-Sept 2023

This value set contains 56 concepts.

CodeSystemDisplayCH ELM Results To FOPH Patient Name RepresentationCH ELM Results To Interpretation Code
  14127-5http://loinc.orgNeisseria gonorrhoeae [Presence] in Anal by Organism specific culture?initials?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-interpretation-codes-pos
  21415-5http://loinc.orgNeisseria gonorrhoeae DNA [Presence] in Urethra by NAA with probe detection?initials?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-interpretation-codes-pos
  21416-3http://loinc.orgNeisseria gonorrhoeae DNA [Presence] in Urine by NAA with probe detection?initials?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-interpretation-codes-pos
  24111-7http://loinc.orgNeisseria gonorrhoeae DNA [Presence] in Specimen by NAA with probe detection?initials?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-interpretation-codes-pos
  32705-6http://loinc.orgNeisseria gonorrhoeae DNA [Presence] in Vaginal fluid by NAA with probe detection?initials?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-interpretation-codes-pos
  43305-2http://loinc.orgNeisseria gonorrhoeae rRNA [Presence] in Specimen by NAA with probe detection?initials?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-interpretation-codes-pos
  47387-6http://loinc.orgNeisseria gonorrhoeae DNA [Presence] in Genital specimen by NAA with probe detection?initials?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-interpretation-codes-pos
  50388-8http://loinc.orgNeisseria gonorrhoeae rRNA [Presence] in Cervix by NAA with probe detection?initials?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-interpretation-codes-pos
  53879-3http://loinc.orgNeisseria gonorrhoeae rRNA [Presence] in Vaginal fluid by NAA with probe detection?initials?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-interpretation-codes-pos
  53927-0http://loinc.orgNeisseria gonorrhoeae rRNA [Presence] in Urethra by NAA with probe detection?initials?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-interpretation-codes-pos
  57458-2http://loinc.orgNeisseria gonorrhoeae rRNA [Presence] in Anal by NAA with probe detection?initials?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-interpretation-codes-pos
  60255-7http://loinc.orgNeisseria gonorrhoeae rRNA [Presence] in Throat by NAA with probe detection?initials?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-interpretation-codes-pos
  60256-5http://loinc.orgNeisseria gonorrhoeae rRNA [Presence] in Urine by NAA with probe detection?initials?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-interpretation-codes-pos
  688-2http://loinc.orgNeisseria gonorrhoeae [Presence] in Cervix by Organism specific culture?initials?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-interpretation-codes-pos
  691-6http://loinc.orgNeisseria gonorrhoeae [Presence] in Genital specimen by Organism specific culture?initials?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-interpretation-codes-pos
  693-2http://loinc.orgNeisseria gonorrhoeae [Presence] in Vaginal fluid by Organism specific culture?initials?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-interpretation-codes-pos
  694-0http://loinc.orgNeisseria gonorrhoeae [Presence] in Semen by Organism specific culture?initials?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-interpretation-codes-pos
  696-5http://loinc.orgNeisseria gonorrhoeae [Presence] in Throat by Organism specific culture?initials?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-interpretation-codes-pos
  697-3http://loinc.orgNeisseria gonorrhoeae [Presence] in Urethra by Organism specific culture?initials?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-interpretation-codes-pos
  698-1http://loinc.orgNeisseria gonorrhoeae [Presence] in Specimen by Organism specific culture?initials?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-interpretation-codes-pos
  80366-8http://loinc.orgNeisseria gonorrhoeae rRNA [Presence] in Anorectal by NAA with probe detection?initials?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-interpretation-codes-pos
  80368-4http://loinc.orgNeisseria gonorrhoeae [Presence] in Anorectal by Organism specific culture?initials?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-interpretation-codes-pos
  88224-1http://loinc.orgNeisseria gonorrhoeae DNA [Presence] in Anorectal by NAA with probe detection?initials?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-interpretation-codes-pos
  88225-8http://loinc.orgNeisseria gonorrhoeae DNA [Presence] in Throat by NAA with probe detection?initials?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-interpretation-codes-pos
  96599-6http://loinc.orgNeisseria gonorrhoeae DNA [Presence] in Cervix by NAA with probe detection?initials?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-interpretation-codes-pos
  14463-4http://loinc.orgChlamydia trachomatis [Presence] in Cervix by Organism specific culture?initials?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-interpretation-codes-pos
  14464-2http://loinc.orgChlamydia trachomatis [Presence] in Vaginal fluid by Organism specific culture?initials?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-interpretation-codes-pos
  14465-9http://loinc.orgChlamydia trachomatis [Presence] in Urethra by Organism specific culture?initials?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-interpretation-codes-pos
  16600-9http://loinc.orgChlamydia trachomatis rRNA [Presence] in Genital specimen by Probe?initials?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-interpretation-codes-pos
  21190-4http://loinc.orgChlamydia trachomatis DNA [Presence] in Cervix by NAA with probe detection?initials?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-interpretation-codes-pos
  21191-2http://loinc.orgChlamydia trachomatis DNA [Presence] in Urethra by NAA with probe detection?initials?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-interpretation-codes-pos
  21613-5http://loinc.orgChlamydia trachomatis DNA [Presence] in Specimen by NAA with probe detection?initials?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-interpretation-codes-pos
  23838-6http://loinc.orgChlamydia trachomatis rRNA [Presence] in Genital fluid by Probe?initials?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-interpretation-codes-pos
  31777-6http://loinc.orgChlamydia trachomatis Ag [Presence] in Specimen?initials?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-interpretation-codes-pos
  42931-6http://loinc.orgChlamydia trachomatis rRNA [Presence] in Urine by NAA with probe detection?initials?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-interpretation-codes-pos
  43304-5http://loinc.orgChlamydia trachomatis rRNA [Presence] in Specimen by NAA with probe detection?initials?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-interpretation-codes-pos
  45084-1http://loinc.orgChlamydia trachomatis DNA [Presence] in Vaginal fluid by NAA with probe detection?initials?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-interpretation-codes-pos
  45090-8http://loinc.orgChlamydia trachomatis DNA [Presence] in Anal by NAA with probe detection?initials?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-interpretation-codes-pos
  45093-2http://loinc.orgChlamydia trachomatis [Presence] in Anal by Organism specific culture?initials?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-interpretation-codes-pos
  45095-7http://loinc.orgChlamydia trachomatis [Presence] in Genital specimen by Organism specific culture?initials?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-interpretation-codes-pos
  50387-0http://loinc.orgChlamydia trachomatis rRNA [Presence] in Cervix by NAA with probe detection?initials?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-interpretation-codes-pos
  51578-3http://loinc.orgChlamydia trachomatis DNA [Presence] in Semen by NAA with probe detection?initials?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-interpretation-codes-pos
  53925-4http://loinc.orgChlamydia trachomatis rRNA [Presence] in Urethra by NAA with probe detection?initials?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-interpretation-codes-pos
  53926-2http://loinc.orgChlamydia trachomatis rRNA [Presence] in Vaginal fluid by NAA with probe detection?initials?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-interpretation-codes-pos
  57287-5http://loinc.orgChlamydia trachomatis rRNA [Presence] in Anal by NAA with probe detection?initials?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-interpretation-codes-pos
  6349-5http://loinc.orgChlamydia trachomatis [Presence] in Specimen by Organism specific culture?initials?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-interpretation-codes-pos
  6356-0http://loinc.orgChlamydia trachomatis DNA [Presence] in Genital specimen by NAA with probe detection?initials?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-interpretation-codes-pos
  6357-8http://loinc.orgChlamydia trachomatis DNA [Presence] in Urine by NAA with probe detection?initials?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-interpretation-codes-pos
  80363-5http://loinc.orgChlamydia trachomatis DNA [Presence] in Anorectal by NAA with probe detection?initials?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-interpretation-codes-pos
  80364-3http://loinc.orgChlamydia trachomatis rRNA [Presence] in Anorectal by NAA with probe detection?initials?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-interpretation-codes-pos
  80367-6http://loinc.orgChlamydia trachomatis [Presence] in Anorectal by Organism specific culture?initials?http://fhir.ch/ig/ch-elm/ValueSet/ch-elm-interpretation-codes-pos
  85827-4http://loinc.orgCarbapenem resistance bla OXA-48-like gene [Presence] by Molecular method?initials
  101552-8http://loinc.orgCampylobacter coli DNA [Presence] in Stool by NAA with probe detection?initials
  100343-3http://loinc.orgInfluenza virus B RNA [Presence] in Saliva (oral fluid) by NAA with probe detection?initials
  94500-6http://loinc.orgSARS-CoV-2 (COVID-19) RNA [Presence] in Respiratory specimen by NAA with probe detection?full-name
  72904005http://snomed.info/sctTreponema pallidum?initials

Explanation of the columns that may appear on this page:

Level A few code lists that FHIR defines are hierarchical - each code is assigned a level. In this scheme, some codes are under other codes, and imply that the code they are under also applies
System The source of the definition of the code (when the value set draws in codes defined elsewhere)
Code The code (used as the code in the resource instance)
Display The display (used in the display element of a Coding). If there is no display, implementers should not simply display the code, but map the concept into their application
Definition An explanation of the meaning of the concept
Comments Additional notes about how to use the code